Profound influence of microarray scanner characteristics on gene expression ratios: analysis and procedure for correction.

Authors:
Lyng H; Badiee A; Svendsrud DH; Hovig E; Myklebost O and 1 more

Journal:
BMC Genomics

Publication Year: 2004

DOI:
10.1186/1471-2164-5-10

PMCID:
PMC356910

PMID:
15018648

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Journal Information

Journal Title: BMC Genomics

Detailed journal information not available.

Publication Details

Subject Category: Genetics & Heredity

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score

2/6

0.0% Transparent

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Data Sharing

Code Sharing

Evidence found in paper:

"the source code of the module is available at [ ]."

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Funding Disclosure

Evidence found in paper:

"AcknowledgementsWe would like to acknowledge Vegard Nygaard and Tor-Kristian Jenssen for implementing the BASE plug-in module, and The Norwegian Microarray Consortium for useful discussions. Financial support from The Norwegian Cancer Society is highly appreciated. The authors do not have any association with any suppliers of microarray scanners and do not claim that the present results are valid for all scanners and scanner brands of the types used in this study."

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Open Access

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Replication

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Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025