The genomes of many yam species contain transcriptionally active endogenous geminiviral sequences that may be functionally expressed.

Publication Year: 2015

DOI:
10.1093/ve/vev002

PMCID:
PMC5014472

PMID:
27774276

Journal Information

Full Title: Virus Evol

Abbreviation: Virus Evol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Virology

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

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2/6
0.0% Transparent
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Evidence found in paper:

"a systematic search of assembled sequences (using the cap3 sequence assembly program ( ) from publicly available d alata est resources (genbank accession numbers: ho809681-ho825421 ho825422-ho840419 and ho850622-ho864016) was performed using the blastn and blastx methods implemented in the software koriblast 3 1 (korilog) with a maximum e -value threshold of 10 - 4 .; however blastx comparisons between legraqvtnnrfdl and all geminiviral sequences deposited in genbank (ncbi blast geminiviridae taxid: 10811) indicated that the highest identity score was detected with the sida micrantha mosaic virus rep protein (accession number cad89704 1 highest percent identity = 80% e value = 1 10 - 4 )."

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Evidence found in paper:

"Conflict of interest . None declared."

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Tool: rtransparent

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Last Updated: Aug 05, 2025