UNAGI: an automated pipeline for nanopore full-length cDNA sequencing uncovers novel transcripts and isoforms in yeast.

Publication Year: 2020

DOI:
10.1007/s10142-020-00732-1

PMCID:
PMC7283198

PMID:
31955296

Journal Information

Full Title: Funct Integr Genomics

Abbreviation: Funct Integr Genomics

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Molecular Biology

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

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Evidence found in paper:

"funding information this work was financially supported by the japan society for the promotion of science (jsps) through grants-in-aid for scientific research grant 10636830 to d m and by japan science and technology agency core research for evolutionary science and technology (jst crest) japan grant jpmjcr15g1 to d o data availability the datasets that support the conclusions of this article are available in the ddbj database (bioproject prjdb8048) under the accession codes drr170478-drr170485. data availability the datasets that support the conclusions of this article are available in the ddbj database (bioproject prjdb8048"

Evidence found in paper:

"the source code is available at the gihub repository ( https://github com/imetosaka/unagi )."

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"Competing interests The authors declare that they have no competing interests."

Evidence found in paper:

"Funding information This work was financially supported by the Japan Society for the Promotion of Science (JSPS) through Grants-in-Aid for Scientific Research, grant 10636830 to D.M., and by Japan Science and Technology Agency, Core Research for Evolutionary Science and Technology (JST CREST), Japan, grant JPMJCR15G1 to D.O."

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Last Updated: Aug 05, 2025