Transcriptome Ortholog Alignment Sequence Tools (TOAST) for phylogenomic dataset assembly.

Journal Information

Full Title: BMC Evol Biol

Abbreviation: BMC Evol Biol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Biology

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
4/6
0.0% Transparent
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Evidence found in paper:

"software a detailed manual and example data files are available through github carolinafishes github io keywords busco ortholog assembly cetacean and teleost fish phylogeny missing data visualization transcriptome concatenated alignment issue-copyright-statement (c) the author(s) 2020 advances in sequencing technology have dramatically decreased the cost of transcriptomic sequencing driving a rapid increase in the representation of non-model organisms in transcriptome public databases."

Evidence found in paper:

"software a detailed manual and example data files are available through github carolinafishes github io keywords busco ortholog assembly cetacean and teleost fish phylogeny missing data visualization transcriptome concatenated alignment issue-copyright-statement (c) the author(s) 2020 advances in sequencing technology have dramatically decreased the cost of transcriptomic sequencing driving a rapid increase in the representation of non-model organisms in transcriptome public databases."

Evidence found in paper:

"Competing interests The authors declare that they have no competing interests."

Evidence found in paper:

"Funding This research was supported, in part, by grants from the National Science Foundation (IOS-1755242 to AD and IOS-1755330 to JAY). The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript."

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Open Access
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Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025