Geographically weighted generalized Farrington algorithm for rapid outbreak detection over short data accumulation periods.

Authors:
Yoneoka D; Kawashima T; Makiyama K; Tanoue Y; Nomura S and 1 more

Journal:
Stat Med

Publication Year: 2021

DOI:
10.1002/sim.9182

PMCID:
PMC9292201

PMID:
34491590

Journal Information

Full Title: Stat Med

Abbreviation: Stat Med

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Statistics as Topic

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
4/6
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Evidence found in paper:

"data availability statement note that the r code and r package "geofarrington" for the proposed method are provided in a github repository ( https://github com/kingqwert/r/blob/master/geofarrington/geo_farrington_withcovs r ) and will be hosted on the cran repository ( https://www r-project org/ ) in the near future thereby facilitating the application of our method by others. data s1 estimated excess deaths during january to september 2020 under covid-19 pandemic in japan in all 47 prefectures click here for additional data file."

Evidence found in paper:

"note that the r code and r package "geofarrington" for the proposed method are provided in a github repository ( https://github com/kingqwert/r/blob/master/geofarrington/geo_farrington_withcovs r ) and will be hosted on the cran repository ( https://www r-project org/ ) in the near future thereby facilitating the application of our method by others.; data availability statement note that the r code and r package "geofarrington" for the proposed method are provided in a github repository ( https://github com/kingqwert/r/blob/master/geofarrington/geo_farrington_withcovs r ) and will be hosted on the cran repository ( https://www r-project org/ ) in the near future thereby facilitating the application of our method by others."

Evidence found in paper:

"CONFLICT OF INTEREST The authors declare no potential conflict of interest."

Evidence found in paper:

"Funding information Daiwa Securities Health Foundation, Ministry of Education, Culture, Sports, Science and Technology, 21H03203; Ministry of Health, Labour and Welfare, 20HA2007; Japan Society for The Promotion of Science, 21K1792; 19H04071; 19K24340"

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Open Access
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Last Updated: Aug 05, 2025