A metagenomics workflow for SARS-CoV-2 identification, co-pathogen detection, and overall diversity.

Authors:
Castañeda-Mogollón D; Kamaliddin C; Oberding L; Liu Y; Mohon AN and 3 more

Journal:
J Clin Virol

Publication Year: 2021

DOI:
10.1016/j.jcv.2021.105025

PMCID:
PMC8564975

PMID:
34775144

View on PubMed View on PMC View Publisher
Journal Information

Full Title: J Clin Virol

Abbreviation: J Clin Virol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Virology

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

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Evidence found in paper:

"overall metagenomics sequencing can be adapted for the current ongoing covid-19 pandemic as well as emerging viral pandemic threats5 all sequencing results are available at the european nucleotide archive (ena) (project id erp132183; sequencing sample ids ers7669237 - ers7669486) 6 this work was funded by (nfrfr-2019-00015) and (alberta gc 2020-03-6) 7 d p d c m l o and c k designed the experiments d p f k and r m f faciliated sample provision with clinical data c k l o and a m performed the experiments."

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COI Disclosure
Evidence found in paper:

"6 Funding This work was funded by Canadian Institutes of Health Research (NFRFR-2019–00,015) and Genome Canada (Alberta, GC 2020–03–6)."

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Paper is freely available to read
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Last Updated: Aug 05, 2025