Antimicrobial resistance patterns and genetic elements associated with the antibiotic resistance of Helicobacter pylori strains from Shanghai.

"availability of data and materials the whole genome shotgun project of the 112 h pylori -shi strains has been deposited at ddbj/ena/genbank (bioproject number prjna690879) under the accessions shown in additional file 3 : table s2. additional file 3 : table s2. additional raw data availability of data and materials the whole genome shotgun project of the 112 h pylori -shi strains has been deposited at ddbj/ena/genbank (bioproject number prjna690879"

"Declarations Ethics approval and consent to participateThis study was approved by the Ethics Committee for Human Studies of Fudan University Huadong Hospital, with written informed consent from all subjects (Ethics Approval Number: 2020K080). Consent for publicationNot applicable. Competing interestsThe authors declare that they have no competing interests. Competing interests The authors declare that they have no competing interests."

"Funding This work was supported by the Shanghai Science and Technology Committee (Grant No: 18411960600, 16411968000, 18411950800), National High Technology Research and Development Program of China (Grant No: 2015AA021107-019), Shanghai Shenkang Hospital Development Center “New Frontier Technology Joint Research Project” (Grant No: SHDC12015107), and the Shanghai Health and Family Planning Commission Youth Project of Scientific Research Subject (Grant No: 20184Y0032). Funding was also received from Shanghai “Rising Stars of Medical Talent” Outstanding Youth Development Program of 2018 and “Huadong Hospital project” (Grant No: 2019jc019)."