Simulations predict differing phase responses to excitation vs. inhibition in theta-resonant pyramidal neurons.

Journal Information

Full Title: J Neurophysiol

Abbreviation: J Neurophysiol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Physiology

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
Transparency Indicators
Click on green indicators to view evidence text
Core Indicators
Evidence found in paper:

"the model is publicly available at https://github com/suny-downstate-medical-center/nonlinear_impedance_phase 10 6084/m9 figshare 22666648 v3 supplemental fig s1: https://doi org/10 6084/m9 figshare 22666648 v3 ; 10 6084/m9 figshare 23994303 v2 supplemental fig s2: https://doi org/10 6084/m9 figshare 23994303 v2 ; 10 6084/m9 figshare 23994321 v4 supplemental fig s3: https://doi org/10 6084/m9 figshare 23994321 v4 ; 10 6084/m9 figshare 23994336 v1 supplemental fig s4: https://doi org/10 6084/m9 figshare 23994336 v1 ; 10 6084/m9 figshare 23994345 v1 supplemental fig s5: https://doi org/10 6084/m9 figshare 23994345 v1 ; 10 6084/m9 figshare 23994351 v1 supplemental fig s6: https://doi org/10 6084/m9 figshare 23994351 v1 ; 10 6084/m9 figshare 23994357 v1 supplemental fig s7: https://doi org/10 6084/m9 figshare 23994357 v1 . the code developed for simulation data analysis and visualization was written in python and it is available https://github com/suny-downstate-medical-center/nonlinear_impedance_phase ."

Evidence found in paper:

"the code developed for simulation data analysis and visualization was written in python and it is available https://github com/suny-downstate-medical-center/nonlinear_impedance_phase .; the model is publicly available at https://github com/suny-downstate-medical-center/nonlinear_impedance_phase 10 6084/m9 figshare 22666648 v3 supplemental fig s1: https://doi org/10 6084/m9 figshare 22666648 v3 ; 10 6084/m9 figshare 23994303 v2 supplemental fig s2: https://doi org/10 6084/m9 figshare 23994303 v2 ; 10 6084/m9 figshare 23994321 v4 supplemental fig s3: https://doi org/10 6084/m9 figshare 23994321 v4 ; 10 6084/m9 figshare 23994336 v1 supplemental fig s4: https://doi org/10 6084/m9 figshare 23994336 v1 ; 10 6084/m9 figshare 23994345 v1 supplemental fig s5: https://doi org/10 6084/m9 figshare 23994345 v1 ; 10 6084/m9 figshare 23994351 v1 supplemental fig s6: https://doi org/10 6084/m9 figshare 23994351 v1 ; 10 6084/m9 figshare 23994357 v1 supplemental fig s7: https://doi org/10 6084/m9 figshare 23994357 v1 . the model is publicly available at https://github com/suny-downstate-medical-center/nonlinear_impedance_phase 10 6084/m9 figshare 22666648 v3 supplemental fig s1: https://doi org/10 6084/m9 figshare 22666648 v3 ; 10 6084/m9 figshare 23994303 v2 supplemental fig s2: https://doi org/10 6084/m9 figshare 23994303 v2 ; 10 6084/m9 figshare 23994321 v4 supplemental fig s3: https://doi org/10 6084/m9 figshare 23994321 v4 ; 10 6084/m9 figshare 23994336 v1 supplemental fig s4: https://doi org/10 6084/m9 figshare 23994336 v1 ; 10 6084/m9 figshare 23994345 v1 supplemental fig s5: https://doi org/10 6084/m9 figshare 23994345 v1 ; 10 6084/m9 figshare 23994351 v1 supplemental fig s6: https://doi org/10 6084/m9 figshare 23994351 v1 ; 10 6084/m9 figshare 23994357 v1 supplemental fig s7: https://doi org/10 6084/m9 figshare 23994357 v1 ."

Evidence found in paper:

"DISCLOSURES No conflicts of interest, financial or otherwise, are declared by the authors."

Evidence found in paper:

"Michael J. Fox Foundation for Parkinson's Research (MJFF)10.13039/100000864"

Protocol Registration
Open Access
Paper is freely available to read
Additional Indicators
Replication
Novelty Statement
Assessment Info

Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025