Cell-type-specific gene expression and regulation in the cerebral cortex and kidney of atypical Setbp1<sup>S858R</sup> Schinzel Giedion Syndrome mice.

Publication Year: 2023

DOI:
10.1111/jcmm.18001

PMCID:
PMC10660642

PMID:
37872881

Journal Information

Full Title: J Cell Mol Med

Abbreviation: J Cell Mol Med

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Molecular Biology

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
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Evidence found in paper:

"data availability statement data and code to reproduce all results of this study including the framework used for this analysis are available at zenodo (doi: 10 5281/zenodo 8192482 ) gse237816 https://github com/lasseignelab/230227_jw_setbp1manuscript (doi: 10 5281/zenodo 8190948 ).; docker images used for this analysis are publicly available on docker hub and zenodo (doi: 10 5281/zenodo 8190923 ).; in addition tf-gene regulatory networks generated for all cell types in kidney and cerebral cortex tissues for both conditions are publicly available (doi: 10 5281/zenodo 8199696 10 5281/zenodo 8199843 ). data availability statement data and code to reproduce all results of this study including the framework used for this analysis are available at zenodo (doi: 10 5281/zenodo 8192482 ) gse237816 https://github com/lasseignelab/230227_jw_setbp1manuscript (doi: 10 5281/zenodo 8190948 ). data availability statement data and code to reproduce all results of this study including the framework used for this analysis are available at zenodo"

Evidence found in paper:

"data availability statement data and code to reproduce all results of this study including the framework used for this analysis are available at zenodo (doi: 10 5281/zenodo 8192482 ) gse237816 https://github com/lasseignelab/230227_jw_setbp1manuscript (doi: 10 5281/zenodo 8190948 )."

Evidence found in paper:

"CONFLICT OF INTEREST STATEMENT The authors have declared no conflicts of interest."

Evidence found in paper:

"FUNDING INFORMATION This work was supported in part by the UAB Lasseigne Lab funds (to BNL), UAB Pilot Center for Precision Animal Modeling (C‐PAM) (1U54OD030167) (to BNL), JHW was funded by the UAB Predoctoral Training Grant in Cell, Molecular, and Developmental Biology (CMDB T32) (5T32GM008111–35), TMS was funded by the Alzheimer's of Central Alabama Lindy Harrell Predoctoral Scholar Program."

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Open Access
Paper is freely available to read
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Last Updated: Aug 05, 2025