3'-tRF-Cys<sup>GCA</sup> overexpression in HEK-293 cells alters the global expression profile and modulates cellular processes and pathways.

Journal Information

Full Title: Funct Integr Genomics

Abbreviation: Funct Integr Genomics

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Molecular Biology

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
4/6
66.7% Transparent
Transparency Indicators
Click on green indicators to view evidence text
Core Indicators
Evidence found in paper:

"data availability the raw sequencing reads have been deposited to the sequence read archive (sra) of ncbi with bioproject accession number prjna999076.; the mass spectrometry proteomics data have been deposited to the proteomexchange consortium via the pride partner repository with the dataset identifier pxd044218. table s2 . regarding proteomics experiments the orbitrap raw data data availability the raw sequencing reads have been deposited to the sequence read archive (sra) of ncbi with bioproject accession number prjna999076"

Code Sharing
Evidence found in paper:

"Declarations Competing interestsProf. Dr. Christos K. Kontos is an Editor for Functional and Integrative Genomics. The authors have no relevant financial or non-financial interests to disclose. Competing interests Prof. Dr. Christos K. Kontos is an Editor for Functional and Integrative Genomics. The authors have no relevant financial or non-financial interests to disclose."

Evidence found in paper:

"Funding Open access funding provided by HEAL-Link Greece. Part of this work was supported by an EMBO Scientific Exchange Grant to Mrs. Paraskevi Karousi. The authors acknowledge support in the proteomics experiments by the project “The Greek Research Infrastructure for Personalized Medicine (pMED-GR)” (MIS 5002802), which is implemented under the Action “Reinforcement of the Research and Innovation Infrastructure”, funded by the Operational Program “Competitiveness, Entrepreneurship and Innovation” (NSRF 2014–2020) and co-financed by Greece and the European Union (European Regional Development Fund). Prof. Dr. Thomas Carell wishes to thank the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project-ID 325871075 (A04) – SFB 1309."

Protocol Registration
Open Access
Paper is freely available to read
Additional Indicators
Replication
Novelty Statement
Assessment Info

Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025