SNP (A > G - rs13057211) but not GT(n) polymorphism in HMOX-1 promotor gene is associated with COVID-19 mortality.

Authors:
Fares K; El-Deeb MK; Elsammak O; Ouf A; Saeed HMS and 3 more

Journal:
BMC Pulm Med

Publication Year: 2023

DOI:
10.1186/s12890-023-02785-x

PMCID:
PMC10734135

PMID:
38129860

Journal Information

Full Title: BMC Pulm Med

Abbreviation: BMC Pulm Med

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Pulmonary Medicine

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
4/6
66.7% Transparent
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Evidence found in paper:

"sd while abnormally distributed variables were expressed as median (range) crp: c-reactive protein pct: procalcitonin ldh: lactate dehydrogenase and hmox-1: hemoxygenase enzyme ? : t-test + : mann-whitney test ? : pearson ?: levene's test significant p -value: less than 0 05 interestingly when the sequence of each case included in the study was examined thoroughly a (a > g) snp (rs13057211) in the gt(n) region of hmox-1 promoter gene was found (fig 4 ) fig 4 sequence results and agarose gel electrophoresis of 2 representative samples from the studies cohort the upper panel (1) shows the sequence of the wild type a (genbank s58267) while (b) shows the the (a > g) snp (rs13057211) the lower panel (2) shows agarose gel electrophoresis of the amplified segment (~ 80 bp) of hmox-1 promoter gene in some samples the amplicon (thick arrow pointing at the 80 bp fragment) was subsequently purified and sequenced.; data availability the datasets generated during the current study are available in the bioproject: repository accession: prjna1015194. data availability the datasets generated during the current study are available in the bioproject: repository accession: prjna1015194"

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"Declarations Ethics approval and consent to participateThis study was approved by the Ethical Committee of the Medical Research Institute, Alexandria University (IORG#: 0008812). Informed Consent of patients/guardians was taken before enrolment in the current study and patients/guardians consented that the research data will be subjected to publication in peer reviewed journals. Consent for publicationAll data and materials used to generate this manuscript are available from the corresponding author for review or if needed in future meta-analysis studies. Competing interestsThe authors declare no conflict of interest. Competing interests The authors declare no conflict of interest."

Evidence found in paper:

"Funding Open access funding provided by The Science, Technology & Innovation Funding Authority (STDF) in cooperation with The Egyptian Knowledge Bank (EKB). This work was carried out using the Chemical Pathology Department Research fund (Fund No.25642; Medical Research Institute) that is allocated by Alexandria University of Egypt."

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Last Updated: Aug 05, 2025