Genome-wide profiling of histone (H3) lysine 4 (K4) tri-methylation (me3) under drought, heat, and combined stresses in switchgrass.

Authors:
Ayyappan V; Sripathi VR; Xie S; Saha MC; Hayford R and 5 more

Journal:
BMC Genomics

Publication Year: 2024

DOI:
10.1186/s12864-024-10068-w

PMCID:
PMC10903042

PMID:
38424499

Journal Information

Journal Title: BMC Genomics

Detailed journal information not available.

Publication Details

Subject Category: Genetics & Heredity

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
4/6
66.7% Transparent
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Evidence found in paper:

"the chip-seq data generated in this study is submitted to the gse (genomic spatial event database) section of the ncbi under bioproject number gse196295 for the chip-seq experiment.; to investigate how dt and dtht responsive peaks identified in this study correlated with the corresponding responsive genes in rna-seq data reported [ ] (ncbi geo accession # gse174278) mapped files were screened for overlapping regions (with flanking 2 kb regions included) using intersect in bedtools.; availability of data and materials the datasets generated and/or analyzed during the current study are available in the gse (genomic spatial event database) repository gse196295 [ https://www ncbi nlm nih gov/geo/query/acc cgi? availability of data and materials the datasets generated and/or analyzed during the current study are available in the gse (genomic spatial event database) repository gse196295"

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Evidence found in paper:

"Declarations Ethics approval and consent to participateNot applicable.Study complied with local and national regulations for using plants. Consent for publicationNot applicable. Competing interestsThe authors declare no competing interests. Competing interests The authors declare no competing interests."

Evidence found in paper:

"Funding This work was supported by Delaware EPSCoR with funds from the National Science Foundation Grant EPS-0814251 and the State of Delaware to VK. These funds have been utilized in the design of the study, data collection, analysis, interpretation, and in writing the manuscript."

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Last Updated: Aug 05, 2025