Uncovering rearrangements in the Tibetan antelope via population-derived genome refinement and comparative analysis with homologous species.

Authors:
Chen J; Wang S; Wang D; Chiu Y; Yang N and 3 more

Journal:
Front Genet

Publication Year: 2024

DOI:
10.3389/fgene.2024.1302554

PMCID:
PMC10902437

PMID:
38425715

Journal Information

Journal Title: Front Genet

Detailed journal information not available.

Publication Details

Subject Category: Genetics & Heredity

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

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4/6
66.7% Transparent
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Evidence found in paper:

"inputs critical for the annotation included: 1) a repeat model derived from repeatmodeler (version: 2 0 2) with the refined reference as input; 2) protein homology evidence obtained from protein sequences of closely related bovidae species including bos mutus (accession number: gca000298355 1) capra hircus (accession number: gca026652205 1) and ovis aries (accession number: gca000298735 2); 3) expressed sequence tags (ests) evidence from prior rna studies of the tibetan antelope (accession number: gca_000400835 1).; data availability statement the data presented in the study are deposited in the national genomics data center repository accession number prjca021064. data availability statement the data presented in the study are deposited in the national genomics data center repository accession number prjca021064"

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Evidence found in paper:

"Conflict of interest Authors YC and ZZ were employed by Shenzhen Byoryn Technology Co., Ltd. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest."

Evidence found in paper:

"The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work was supported by the Natural Science Foundation of Qinghai Province (2020-ZJ-958Q) and Joint Grant from Chinese Academy of Sciences—People’s Government of Qinghai Province on Sanjiangyuan National Park (LHZX-2020-01)."

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Last Updated: Aug 05, 2025