Research Papers

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A comparison of methods for detecting DNA methylation from long-read sequencing of human genomes.
Sigurpalsdottir BD; Stefansson OA; Holley G; Beyter D; Zink F; Hardarson MÞ; Sverrisson SÞ; Kristinsdottir N; Magnusdottir DN; Magnusson OÞ; Gudbjartsson DF; Halldorsson BV; Stefansson K.
Genome Biol (Unknown)
Published: 2024
3/6 Transparent
Data
Distribution patterns of molecular markers of antimalarial drug resistance in Plasmodium falciparum isolates on the Tha…
Muhamad P; Phompradit P; Chaijaroenkul W; Na-Bangchang K.
BMC Genomics (Unknown)
Published: 2024
3/6 Transparent
Funding Declared
DNA-QLC: an efficient and reliable image encoding scheme for DNA storage.
Zheng Y; Cao B; Zhang X; Cui S; Wang B; Zhang Q.
BMC Genomics (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
High genetic diversity of the himalayan marmot relative to plague outbreaks in the Qinghai-Tibet Plateau, China.
Ma Y; Liu P; Li Z; Yue Y; Zhao Y; He J; Zhao J; Song X; Wang J; Liu Q; Lu L.
BMC Genomics (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Bioinformatics analysis identifies a key gene HLA_DPA1 in severe influenza-associated immune infiltration.
Chen L; Hua J; He X.
BMC Genomics (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
New insights into the all-testis differentiation in zebrafish with compromised endogenous androgen and estrogen synthes…
Ruan Y; Li X; Wang X; Zhai G; Lou Q; Jin X; He J; Mei J; Xiao W; Gui J; Yin Z.
PLoS Genet (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Whole-genome sequencing and comparative genomics reveal candidate genes associated with quality traits in Dioscorea ala…
Mota APZ; Dossa K; Lechaudel M; Cornet D; Mournet P; Santoni S; Lopez D; Chaïr H.
BMC Genomics (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Maize green leaf area index dynamics: genetic basis of a new secondary trait for grain yield in optimal and drought con…
Blancon J; Buet C; Dubreuil P; Tixier MH; Baret F; Praud S.
Theor Appl Genet (Unknown)
Published: 2024
3/6 Transparent
Funding Declared
RNA-seq analysis reveals narrow differential gene expression in MEP and MVA pathways responsible for phytochemical dive…
Ahmadi H; Fatahi R; Zamani Z; Shokrpour M; Sheikh-Assadi M; Poczai P.
BMC Genomics (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Integrated Metabolomic and transcriptomic analyses reveal deoxycholic acid promotes transmissible gastroenteritis virus…
Zhou Y; Xu C; Gu S; Xiao Y; Wu S; Wang H; Bao W.
BMC Genomics (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Extreme restructuring of cis-regulatory regions controlling a deeply conserved plant stem cell regulator.
Ciren D; Zebell S; Lippman ZB.
PLoS Genet (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Epigenome-wide association study of long-term psychosocial stress in older adults.
Opsasnick LA; Zhao W; Schmitz LL; Ratliff SM; Faul JD; Zhou X; Needham BL; Smith JA.
Epigenetics (Unknown)
Published: 2024
2/6 Transparent
Insight into telomere regulation: road to discovery and intervention in plasma drug-protein targets.
Ding K; Zhangwang J; Lei M; Xiong C.
BMC Genomics (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Construction of relatedness matrices in autopolyploid populations using low-depth high-throughput sequencing data.
Bilton TP; Sharma SK; Schofield MR; Black MA; Jacobs JME; Bryan GJ; Dodds KG.
Theor Appl Genet (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Pathogen lifestyle determines host genetic signature of quantitative disease resistance loci in oilseed rape (Brassica …
Jacott CN; Schoonbeek HJ; Sidhu GS; Steuernagel B; Kirby R; Zheng X; von Tiedermann A; Macioszek VK; Kononowicz AK; Fell H; Fitt BDL; Mitrousia GK; Stotz HU; Ridout CJ; Wells R.
Theor Appl Genet (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Characterization and mitigation of artifacts derived from NGS library preparation due to structure-specific sequences i…
Chen H; Zhang Y; Wang B; Liao R; Duan X; Yang C; Chen J; Hao Y; Shu Y; Cai L; Leng X; Qian NS; Sun D; Niu B; Zhou Q.
BMC Genomics (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Mutations in TSPAN12 gene causing familial exudative vitreoretinopathy.
Ju Y; Chen T; Ruan L; Zhao Y; Chang Q; Huang X.
Hum Genomics (Unknown)
Published: 2024
3/6 Transparent
Funding Declared
Annotated genome and transcriptome of the endangered Caribbean mountainous star coral (Orbicella faveolata) using PacBi…
Young BD; Williamson OM; Kron NS; Andrade Rodriguez N; Isma LM; MacKnight NJ; Muller EM; Rosales SM; Sirotzke SM; Traylor-Knowles N; Williams SD; Studivan MS.
BMC Genomics (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Differential regulation of miRNAs involved in the susceptible and resistance responses of wheat cultivars to wheat stre…
Soylu I; Lakshman DK; Tatineni S; Galvez LC; Mitra A.
BMC Genomics (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Anthracyclines induce cardiotoxicity through a shared gene expression response signature.
Matthews ER; Johnson OD; Horn KJ; Gutiérrez JA; Powell SR; Ward MC.
PLoS Genet (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Bioinformatic analysis and experimental validation of cuproptosis-related LncRNA as a novel biomarker for prognosis and…
Liang S; Ji L; Yu Z; Cheng Y; Gao R; Yan W; Zhang F.
Hereditas (Unknown)
Published: 2024
3/6 Transparent
Funding Declared
A preliminary study of the miRNA restitution effect on CNV-induced miRNA downregulation in CAKUT.
Mitrovic K; Zivotic I; Kolic I; Zakula J; Zivkovic M; Stankovic A; Jovanovic I.
BMC Genomics (Unknown)
Published: 2024
3/6 Transparent
Funding Declared
Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni.
Brann T; Beltramini A; Chaparro C; Berriman M; Doyle SR; Protasio AV.
BMC Genomics (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Transcriptomics and metabolomics analysis reveal the dietary copper deficiency and supplementation effects of liver gen…
Jin X; Meng L; Qi Z; Mi L.
BMC Genomics (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
RNA sequencing identifies key genes involved in intramuscular fat deposition in chickens at different developmental sta…
Zhu J; Wang Y; Su Y; Zheng M; Cui H; Chen Z.
BMC Genomics (Unknown)
Published: 2024
3/6 Transparent
Funding Declared