Research Papers

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Between but Not Within-Species Variation in the Distribution of Fitness Effects.
James J; Kastally C; Budde KB; González-Martínez SC; Milesi P; Pyhäjärvi T; Lascoux M; GenTree Consortium .
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Phylogenomics Reveals High Levels of Incomplete Lineage Sorting at the Ancestral Nodes of the Macaque Radiation.
Tan X; Qi J; Liu Z; Fan P; Liu G; Zhang L; Shen Y; Li J; Roos C; Zhou X; Li M.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Low Mutation Load in a Supergene Underpinning Alternative Male Mating Strategies in Ruff (Calidris pugnax).
Hill J; Enbody ED; Bi H; Lamichhaney S; Lei W; Chen J; Wei C; Liu Y; Schwochow D; Younis S; Widemo F; Andersson L.
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Selection on Visual Opsin Genes in Diurnal Neotropical Frogs and Loss of the SWS2 Opsin in Poison Frogs.
Wan YC; Navarrete Méndez MJ; O'Connell LA; Uricchio LH; Roland AB; Maan ME; Ron SR; Betancourth-Cundar M; Pie MR; Howell KA; Richards-Zawacki CL; Cummings ME; Cannatella DC; Santos JC; Tarvin RD.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Genomic Signatures Associated with Transitions to Viviparity in Cyprinodontiformes.
Yusuf LH; Saldívar Lemus Y; Thorpe P; Macías Garcia C; Ritchie MG.
Mol Biol Evol (Unknown)
Published: 2023
2/6 Transparent
Funding Declared
Asymmetric Evolution of Protein Domains in the Leucine-Rich Repeat Receptor-Like Kinase Family of Plant Signaling Prote…
Man J; Harrington TA; Lally K; Bartlett ME.
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Tensor Decomposition-based Feature Extraction and Classification to Detect Natural Selection from Genomic Data.
Amin MR; Hasan M; Arnab SP; DeGiorgio M.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Code Funding Declared
A Chromosome-Level Genome Assembly of the Reef Stonefish (Synanceia verrucosa) Provides Novel Insights into Stonustoxin…
Tang T; Huang Y; Peng C; Liao Y; Lv Y; Shi Q; Gao B.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Evolution of the Mutation Spectrum Across a Mammalian Phylogeny.
Beichman AC; Robinson J; Lin M; Moreno-Estrada A; Nigenda-Morales S; Harris K.
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Genomic Variation, Population History, and Long-Term Genetic Adaptation to High Altitudes in Tibetan Partridge (Perdix …
Palacios C; Wang P; Wang N; Brown MA; Capatosto L; Du J; Jiang J; Zhang Q; Dahal N; Lamichhaney S.
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Whole-genome Comparisons Identify Repeated Regulatory Changes Underlying Convergent Appendage Evolution in Diverse Fish…
Chen HI; Turakhia Y; Bejerano G; Kingsley DM.
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Usi…
Bhaskara GB; Haque T; Bonnette JE; Napier JD; Bauer D; Schmutz J; Juenger TE.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Code Funding Declared
A Proofreading Mutation with an Allosteric Effect Allows a Cluster of SARS-CoV-2 Viruses to Rapidly Evolve.
Mack AH; Menzies G; Southgate A; Jones DD; Connor TR.
Mol Biol Evol (Unknown)
Published: 2023
3/6 Transparent
Data Funding Declared
Genomics Reveals Complex Population History and Unexpected Diversity of Eurasian Otters (Lutra lutra) in Britain Relati…
du Plessis SJ; Blaxter M; Koepfli KP; Chadwick EA; Hailer F.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Code Funding Declared
New Evolutionary Insights into RpoA: A Novel Quorum Sensing Reprograming Factor in Pseudomonas aeruginosa.
Cai W; Liao H; Lu M; Zhou X; Cheng X; Staehelin C; Dai W.
Mol Biol Evol (Unknown)
Published: 2023
3/6 Transparent
Data Funding Declared
Intra- vs. Interhost Evolution of SARS-CoV-2 Driven by Uncorrelated Selection-The Evolution Thwarted.
Hou M; Shi J; Gong Z; Wen H; Lan Y; Deng X; Fan Q; Li J; Jiang M; Tang X; Wu CI; Li F; Ruan Y.
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Cysteine Enrichment Mediates Co-Option of Uricase in Reptilian Skin and Transition to Uricotelism.
Mori G; Liuzzi A; Ronda L; Di Palma M; Chegkazi MS; Bui S; Garcia-Maya M; Ragazzini J; Malatesta M; Della Monica E; Rivetti C; Antin PB; Bettati S; Steiner RA; Percudani R.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Code Funding Declared
Acute and Long-Term Consequences of Co-opted doublesex on the Development of Mimetic Butterfly Color Patterns.
VanKuren NW; Doellman MM; Sheikh SI; Palmer Droguett DH; Massardo D; Kronforst MR.
Mol Biol Evol (Unknown)
Published: 2023
3/6 Transparent
Data Funding Declared
PhyloAcc-GT: A Bayesian Method for Inferring Patterns of Substitution Rate Shifts on Targeted Lineages Accounting for G…
Yan H; Hu Z; Thomas GWC; Edwards SV; Sackton TB; Liu JS.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Code Funding Declared
Updated Phylogeny and Protein Structure Predictions Revise the Hypothesis on the Origin of MADS-box Transcription Facto…
Qiu Y; Li Z; Walther D; Köhler C.
Mol Biol Evol (Unknown)
Published: 2023
2/6 Transparent
Funding Declared
De Novo Mutation Rates in Sticklebacks.
Zhang C; Reid K; Sands AF; Fraimout A; Schierup MH; Merilä J.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Code Funding Declared
Growth-dependent Gene Expression Variation Influences the Strength of Codon Usage Biases.
Johnson MM; Hockenberry AJ; McGuffie MJ; Vieira LC; Wilke CO.
Mol Biol Evol (Unknown)
Published: 2023
4/6 Transparent
Data Code Funding Declared
Interdisciplinary Analyses of Bronze Age Communities from Western Hungary Reveal Complex Population Histories.
Gerber D; Szeifert B; Székely O; Egyed B; Gyuris B; Giblin JI; Horváth A; Köhler K; Kulcsár G; Kustár Á; Major I; Molnár M; Palcsu L; Szeverényi V; Fábián S; Mende BG; Bondár M; Ari E; Kiss V; Szécsényi-Nagy A.
Mol Biol Evol (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Evolution of Human Brain Left-Right Asymmetry: Old Genes with New Functions.
Wang J; Ma S; Yu P; He X.
Mol Biol Evol (Unknown)
Published: 2023
3/6 Transparent
Code Funding Declared
Developmental Selection and the Perception of Mutation Bias.
Majic P; Payne JL.
Mol Biol Evol (Unknown)
Published: 2023
3/6 Transparent
Data Funding Declared