Research Papers

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Pathogen lifestyle determines host genetic signature of quantitative disease resistance loci in oilseed rape (Brassica …
Jacott CN; Schoonbeek HJ; Sidhu GS; Steuernagel B; Kirby R; Zheng X; von Tiedermann A; Macioszek VK; Kononowicz AK; Fell H; Fitt BDL; Mitrousia GK; Stotz HU; Ridout CJ; Wells R.
Theor Appl Genet (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
The developmental trajectory of 1H-MRS brain metabolites from childhood to adulthood.
Thomson AR; Hwa H; Pasanta D; Hopwood B; Powell HJ; Lawrence R; Tabuenca ZG; Arichi T; Edden RAE; Chai X; Puts NA.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared
Deep learning-based metastasis detection in patients with lung cancer to enhance reproducibility and reduce workload in…
Park YW; Park JE; Ahn SS; Han K; Kim N; Oh JY; Lee DH; Won SY; Shin I; Kim HS; Lee SK.
Unknown Journal
Published: 2024
4/6 Transparent
Code Funding Declared
Characterization and mitigation of artifacts derived from NGS library preparation due to structure-specific sequences i…
Chen H; Zhang Y; Wang B; Liao R; Duan X; Yang C; Chen J; Hao Y; Shu Y; Cai L; Leng X; Qian NS; Sun D; Niu B; Zhou Q.
BMC Genomics (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
A comparative study of CNN-capsule-net, CNN-transformer encoder, and Traditional machine learning algorithms to classif…
Holguin-Garcia SA; Guevara-Navarro E; Daza-Chica AE; Patiño-Claro MA; Arteaga-Arteaga HB; Ruz GA; Tabares-Soto R; Bravo-Ortiz MA.
BMC Med Inform Decis Mak (Unknown)
Published: 2024
5/6 Transparent
Data Code Funding Declared
Efficient organized colorectal cancer screening in Shenzhen: a microsimulation modelling study.
Zhu M; Zhong X; Liao T; Peng X; Lei L; Peng J; Cao Y.
BMC Public Health (Unknown)
Published: 2024
4/6 Transparent
Code Funding Declared
REDCapDM: An R package with a set of data management tools for a REDCap project.
Carmezim J; Satorra P; Peñafiel J; García-Lerma E; Pallarès N; Santos N; Tebé C.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared
Single-cell RNA sequencing reveals peripheral blood leukocyte responses to spinal cord injury in mice with humanised im…
Gillespie ER; Grice LF; Courtney IG; Lao HW; Jung W; Ramkomuth S; Xie J; Brown DA; Walsham J; Radford KJ; Nguyen QH; Ruitenberg MJ.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared
Effect of COVID-19 Pandemic Lockdowns on Body Mass Index of Primary School Children from Different Socioeconomic Backgr…
Piesch L; Stojan R; Zinner J; Büsch D; Utesch K; Utesch T.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared
Smartphone keyboard dynamics predict affect in suicidal ideation.
Knol L; Nagpal A; Leaning IE; Idda E; Hussain F; Ning E; Eisenlohr-Moul TA; Beckmann CF; Marquand AF; Leow A.
Unknown Journal
Published: 2024
4/6 Transparent
Code Funding Declared
Designing patient-oriented combination therapies for acute myeloid leukemia based on efficacy/toxicity integration and …
Mirzaie M; Gholizadeh E; Miettinen JJ; Ianevski F; Ruokoranta T; Saarela J; Manninen M; Miettinen S; Heckman CA; Jafari M.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared
Candida albicans translocation through the intestinal epithelial barrier is promoted by fungal zinc acquisition and lim…
Sprague JL; Schille TB; Allert S; Trümper V; Lier A; Großmann P; Priest EL; Tsavou A; Panagiotou G; Naglik JR; Wilson D; Schäuble S; Kasper L; Hube B.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared
Combining Homologous Recombination-Deficient Testing and Functional RAD51 Analysis Enhances the Prediction of Poly(ADP-…
Korsholm LM; Kjeldsen M; Perino L; Mariani L; Nyvang GB; Kristensen E; Bagger FO; Mirza MR; Rossing M.
Unknown Journal
Published: 2024
5/6 Transparent
Code Registered Funding Declared
PAPipe: a pipeline for comprehensive population genetic analysis.
Park N; Kim H; Oh J; Kim J; Heo C; Kim J.
Mol Biol Evol (Unknown)
Published: 2024
4/6 Transparent
Data Code Funding Declared
Short-Term Exposure to Fine Particulate Matter and Nitrogen Dioxide and Mortality in 4 Countries.
Ma Y; Nobile F; Marb A; Dubrow R; Stafoggia M; Breitner S; Kinney PL; Chen K.
Unknown Journal
Published: 2024
2/6 Transparent
Code
Educational Mobility, Pace of Aging, and Lifespan Among Participants in the Framingham Heart Study.
Graf GHJ; Aiello AE; Caspi A; Kothari M; Liu H; Moffitt TE; Muennig PA; Ryan CP; Sugden K; Belsky DW.
JAMA Netw Open (Unknown)
Published: 2024
3/6 Transparent
Data Code
Self-Reported Everyday Functioning After COVID-19 Infection.
Iwashyna TJ; Smith VA; Seelye S; Bohnert ASB; Boyko EJ; Hynes DM; Ioannou GN; Maciejewski ML; O'Hare AM; Viglianti EM; Berkowitz TS; Pura J; Womer J; Kamphuis LA; Monahan ML; Bowling CB; VA HSR&D COVID-19 Observational Research Collaboratory (CORC).
Unknown Journal
Published: 2024
2/6 Transparent
Code
Predicting the Need for Blood Transfusions in Cardiac Surgery: A Comparison between Machine Learning Algorithms and Est…
Cunha CBCD; Lima TA; Ferraz DLM; Silva ITC; Santiago MKD; Sena GR; Monteiro VS; Andrade LB.
Unknown Journal
Published: 2024
4/6 Transparent
Code Funding Declared
Optimizing the measurement of sample entropy in resting-state fMRI data.
Roediger DJ; Butts J; Falke C; Fiecas MB; Klimes-Dougan B; Mueller BA; Cullen KR.
Unknown Journal
Published: 2024
4/6 Transparent
Code Funding Declared
Compensating unknown speed of sound in learned fast 3D limited-view photoacoustic tomography.
Poimala J; Cox B; Hauptmann A.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared
Refined image quality assessment for color fundus photography based on deep learning.
Guo T; Liu K; Zou H; Xu X; Yang J; Yu Q.
Unknown Journal
Published: 2024
4/6 Transparent
Code Funding Declared
Within-host evolution of SARS-CoV-2: how often are <i>de novo</i> mutations transmitted from symptomatic infections?
Korosec CS; Wahl LM; Heffernan JM.
Virus Evol (Unknown)
Published: 2024
3/6 Transparent
Code Funding Declared
Automated segmentation of lesions and organs at risk on [<sup>68</sup>Ga]Ga-PSMA-11 PET/CT images using self-supervised…
Yazdani E; Karamzadeh-Ziarati N; Cheshmi SS; Sadeghi M; Geramifar P; Vosoughi H; Jahromi MK; Kheradpisheh SR.
Cancer Imaging (Unknown)
Published: 2024
4/6 Transparent
Code Funding Declared
Deep learning segmentation of the choroid plexus from structural magnetic resonance imaging (MRI): validation and norma…
Eisma JJ; McKnight CD; Hett K; Elenberger J; Han CJ; Song AK; Considine C; Claassen DO; Donahue MJ.
Unknown Journal
Published: 2024
4/6 Transparent
Code Funding Declared
Targeted deletion of CD244 on monocytes promotes differentiation into anti-tumorigenic macrophages and potentiates PD-L…
Kim J; Kim TJ; Chae S; Ha H; Park Y; Park S; Yoon CJ; Lim SA; Lee H; Kim J; Kim J; Im K; Lee K; Kim J; Kim D; Lee E; Shin MH; Park SI; Rhee I; Jung K; Lee J; Lee KH; Hwang D; Lee KM.
Unknown Journal
Published: 2024
5/6 Transparent
Data Code Funding Declared