Research Papers

25 of 106 papers

CSV Excel
Quick filters: Open Data Open Code Pre-registered Funding Declared COI Declared Open Access Clear Filters
Core hyphosphere microbiota of Fusarium oxysporum f. sp. niveum.
Thomas VE; Antony-Babu S.
Environ Microbiome (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Niche differentiation and biogeography of Bathyarchaeia in paddy soil ecosystems: a case study in eastern China.
Yi X; Brandt KK; Xue S; Peng J; Wang Y; Li M; Deng Y; Duan G.
Environ Microbiome (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Subtropical coastal microbiome variations due to massive river runoff after a cyclonic event.
Meyneng M; Lemonnier H; Le Gendre R; Plougoulen G; Antypas F; Ansquer D; Serghine J; Schmitt S; Siano R.
Environ Microbiome (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Weather in two climatic regions shapes the diversity and drives the structure of fungal endophytic community of bilberr…
Nguyen MP; Lehosmaa K; Toth K; Koskimäki JJ; Häggman H; Pirttilä AM.
Environ Microbiome (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Bacterial wilt affects the structure and assembly of microbial communities along the soil-root continuum.
Liang J; Wei C; Song X; Wang R; Shi H; Tan J; Cheng D; Wang W; Wang X.
Environ Microbiome (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Phytoplankton ecology in the early years of a boreal oil sands end pit lake.
Furgason CC; Smirnova AV; Dacks JB; Dunfield PF.
Environ Microbiome (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
A unified compendium of prokaryotic and viral genomes from over 300 anaerobic digestion microbiomes.
Centurion VB; Rossi A; Orellana E; Ghiotto G; Kakuk B; Morlino MS; Basile A; Zampieri G; Treu L; Campanaro S.
Environ Microbiome (Unknown)
Published: 2024
4/6 Transparent
Data Funding Declared
Increased prokaryotic diversity in the Red Sea deep scattering layer.
Huete-Stauffer TM; Logares R; Ansari MI; Røstad A; Calleja ML; Morán XAG.
Environ Microbiome (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly …
Costa LSAS; de Faria MR; Chiaramonte JB; Mendes LW; Sepo E; de Hollander M; Fernandes JMC; Carrión VJ; Bettiol W; Mauchline TH; Raaijmakers JM; Mendes R.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Grapevine bacterial communities display compartment-specific dynamics over space and time within the Central Valley of …
Swift JF; Migicovsky Z; Trello GE; Miller AJ.
Environ Microbiome (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
The gut microbiome mediates adaptation to scarce food in Coleoptera.
Moldovan OT; Carrell AA; Bulzu PA; Levei E; Bucur R; Sitar C; Faur L; Mirea IC; Șenilă M; Cadar O; Podar M.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Exploring the influence of climatic variables on mycobiome composition and community diversity in lichens: insights fro…
Yang J; Woo JJ; Kim W; Oh SY; Hur JS.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Distinct coral environments shape the dynamic of planktonic Vibrio spp.
Zhao W; Chen X; Liu R; Tian P; Niu W; Zhang XH; Liu J; Wang X.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Compost, plants and endophytes versus metal contamination: choice of a restoration strategy steers the microbiome in po…
Kracmarova-Farren M; Papik J; Uhlik O; Freeman J; Foster A; Leewis MC; Creamer C.
Environ Microbiome (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Distinct patterns of distribution, community assembly and cross-domain co-occurrence of planktonic archaea in four majo…
Hu X; Huang Y; Gu G; Hu H; Yan H; Zhang H; Zhang R; Zhang D; Wang K.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Fungal community inside lichen: a curious case of sparse diversity and high modularity.
Yang J; Woo JJ; Oh SY; Kim W; Hur JS.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Effects of marine sediment as agricultural substrate on soil microbial diversity: an amplicon sequencing study.
Núñez-Gómez D; Melgarejo P; Martínez-Nicolás JJ; Hernández F; Martínez-Font R; Lidón V; Legua P.
Environ Microbiome (Unknown)
Published: 2023
3/6 Transparent
Funding Declared
A symbiotic footprint in the plant root microbiome.
Hartman K; Schmid MW; Bodenhausen N; Bender SF; Valzano-Held AY; Schlaeppi K; van der Heijden MGA.
Environ Microbiome (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Elucidating the effects of organic vs. conventional cropping practice and rhizobia inoculation on rhizosphere microbial…
Paudel D; Wang L; Poudel R; Acharya JP; Victores S; de Souza CHL; Rios E; Wang J.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Evolutionary patterns of archaea predominant in acidic environment.
Bargiela R; Korzhenkov AA; McIntosh OA; Toshchakov SV; Yakimov MM; Golyshin PN; Golyshina OV.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Integrative meta-omics in Galaxy and beyond.
Schiml VC; Delogu F; Kumar P; Kunath B; Batut B; Mehta S; Johnson JE; Grüning B; Pope PB; Jagtap PD; Griffin TJ; Arntzen MØ.
Environ Microbiome (Unknown)
Published: 2023
5/6 Transparent
Data Code Funding Declared
Distinct taxonomic and functional profiles of high Arctic and alpine permafrost-affected soil microbiomes.
Sannino C; Qi W; Rüthi J; Stierli B; Frey B.
Environ Microbiome (Unknown)
Published: 2023
3/6 Transparent
Data Funding Declared
New insight into the bark beetle ips typographus bacteriome reveals unexplored diversity potentially beneficial to the …
Peral-Aranega E; Saati-Santamaría Z; Ayuso-Calles M; Kostovčík M; Veselská T; Švec K; Rivas R; Kolařik M; García-Fraile P.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
The impacts of ocean acidification, warming and their interactive effects on coral prokaryotic symbionts.
Li J; Chai G; Xiao Y; Li Z.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared
Regional biogeography versus intra-annual dynamics of the root and soil microbiome.
Bell-Dereske LP; Benucci GMN; da Costa PB; Bonito G; Friesen ML; Tiemann LK; Evans SE.
Environ Microbiome (Unknown)
Published: 2023
4/6 Transparent
Data Funding Declared