Deciphering core phyllomicrobiome assemblage on rice genotypes grown in contrasting agroclimatic zones: implications for phyllomicrobiome engineering against blast disease.

Publication Year: 2022

DOI:
10.1186/s40793-022-00421-5

PMCID:
PMC9134649

PMID:
35619157

Journal Information

Full Title: Environ Microbiome

Abbreviation: Environ Microbiome

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics & Heredity

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
4/6
66.7% Transparent
Transparency Indicators
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Core Indicators
Evidence found in paper:

"availability of data and materials data sets were submitted to ncbi genbank with bioproject id prjna681302.; the data sets were also uploaded in mg-rast server under project id mgp94842 with following sample name and deposition numbers; prr78_plm1 (mgm4895994 3); prr78_plm2 (mgm4895995 3); pusa1602_plm1 (mgm4895999 3); pusa1602_plm2 (mgm4896000 3); prr78_ani1 (mgm4895998 3); prr78_ani2 (mgm4896001 3); pusa1602_ani1 (mgm4895997 3); pusa1602_ani2 (mgm4895996 3). availability of data and materials data sets were submitted to ncbi genbank with bioproject id prjna681302"

Code Sharing
Evidence found in paper:

"Declarations Ethics approval and consent to participateOur manuscript entitled “Deciphering core-phyllomicrobiome assemblage of rice genotypes grown in contrasting agroclimatic zones: Implications for microbiome engineering against blast disease" complies with the Ethical Rules applicable to the journal. Consent for publicationsAll authors have read the manuscript and consented to the publication. Competing interestsThe authors declared no conflict of interest. Competing interests The authors declared no conflict of interest."

Evidence found in paper:

"Funding Kuleshwar Prasad Sahu offers sincere thanks to the Council of Scientific and Industrial Research (CSIR) for financial support in the form of Junior and Senior Research Fellowships (File No: 09/083(0367)/2016-EMR-I) for the Ph. D. program. Kuleshwar Prasad Sahu and A. Kumar are grateful to NAHEP-CAAST on "Genomics assisted crop improvement and management" for financial assistance."

Protocol Registration
Open Access
Paper is freely available to read
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Assessment Info

Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025