Enhancing capacity for national genomics surveillance of antimicrobial resistance in public health laboratories in Kenya.

"pmc pmc10483422 pmc10483422 10483422 37646415 37646415 001098 10 1099/mgen 0 001098 methods pathogens and epidemiology enhancing capacity for national genomics surveillance of antimicrobial resistance in public health laboratories in kenya http://mgen microbiologyresearch org *correspondence: lillian musila lillian musila@usamru-k org raw sequence data generated in this project were deposited in the national center for biotechnology information (ncbi) sequence reads archive (sra) public database under the accession numbers srr22877381-srr22877391 (bioproject accession prjna915250).; the sequences were deposited in the national center for biotechnology information (ncbi) sequence reads archive (sra) public database under the accession numbers srr22877381-srr22877391 (bioproject accession prjna915250 ). the course manual and lectures are available at https://figshare com/s/eda6d720b994efac1cf3 2023 30 8 2023 30 8 2023 [ comment ] 9 8 mgen001098 24 2 2023 06 8 2023 (c) 2023 the authors2023 https://creativecommons org/licenses/by/4 0/ this is an open-access article distributed under the terms of the creative commons attribution license."

"bioinformatic tools were installed using the conda package manager before the bioinformatics training sessions and included the analysis tool hamronization ( https://github com/pha4ge/s )."

"Conflicts of interest The authors declare that there are no conflicts of interest."

"Funding information This project was supported by the Public Health Alliance for Genomic Epidemiology Project ID: (PHA4GE) Ref#: PHA4GE/2021–01."