Robust, scalable, and informative clustering for diverse biological networks.

Authors:
Gaiteri C; Connell DR; Sultan FA; Iatrou A; Ng B and 3 more

Journal:
Genome Biol

Publication Year: 2023

DOI:
10.1186/s13059-023-03062-0

PMCID:
PMC10571258

PMID:
37828545

Journal Information

Full Title: Genome Biol

Abbreviation: Genome Biol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
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Core Indicators
Evidence found in paper:

"availability of data and materials code availability: the matlab version of the code is freely available under the mit license at github com/cogdishion/se2 [ 89 ] and zenodo [ 91 ] https://doi org/10 5281/zenodo 8322854 ).; the c version is available under the gplv2 + license at github com/davidrconnell/igraph-se2 [ 92 ] and zenodo [ 93 ]. availability of data and materials code availability: the matlab version of the code is freely available under the mit license at github com/cogdishion/se2 [ 89 ] and zenodo [ 91 ] https://doi org/10 5281/zenodo 8322854 ). availability of data and materials code availability: the matlab version of the code is freely available under the mit license at github com/cogdishion/se2 [ 89 ] and zenodo"

Evidence found in paper:

"availability of data and materials code availability: the matlab version of the code is freely available under the mit license at github com/cogdishion/se2 [ 89 ] and zenodo [ 91 ] https://doi org/10 5281/zenodo 8322854 ).; the c version is available under the gplv2 + license at github com/davidrconnell/igraph-se2 [ 92 ] and zenodo [ 93 ]."

Evidence found in paper:

"Declarations Ethics approval and consent to participateNot applicable. Consent for publicationNot applicable. Competing interestsThe authors declare that they have no competing interests. Competing interests The authors declare that they have no competing interests."

Evidence found in paper:

"Funding This study was funded by National Institute on Aging grants R01AG057911 and R01AG061798 (CG, AI, BN, AZ, ST). BKS was partially supported by DARPA under contract HR001121C0165, and the National Science Foundation Grant NSF-SBE 2214216."

Protocol Registration
Open Access
Paper is freely available to read
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Replication
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Assessment Info

Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025