A genome catalog of the early-life human skin microbiome.

Authors:
Shen Z; Robert L; Stolpman M; Che Y; Allen KJ and 17 more

Journal:
Genome Biol

Publication Year: 2023

DOI:
10.1186/s13059-023-03090-w

PMCID:
PMC10636849

PMID:
37946302

Journal Information

Full Title: Genome Biol

Abbreviation: Genome Biol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
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Evidence found in paper:

"availability of data and materials the raw metagenomic sequencing data are available in the ncbi bioproject database under project number prjna971252 [ 73 ]. all the code utilized in this study is available on github: https://github com/skinmicrobiome/elsg [ 75 ] and zenodo: 10 5281/zenodo 8422805 [ 76 ].; elgg [ 19 ] catalog is available at 10 5281/zenodo 6969520 [ 79 ]. availability of data and materials the raw metagenomic sequencing data are available in the ncbi bioproject database under project number prjna971252"

Evidence found in paper:

"all the code utilized in this study is available on github: https://github com/skinmicrobiome/elsg [ 75 ] and zenodo: 10 5281/zenodo 8422805 [ 76 ]."

Evidence found in paper:

"Declarations Ethics approval and consent to participateThe Vitality Trial is sponsored by Murdoch Children’s Research Institute (http://www.clinicaltrials.gov/ct2/show/NCT02112734). This study was approved by the Royal Children’s Hospital Human Research Ethics Committee (#34168) and conducted in accordance with the Declaration of Helsinki. Written informed consent was obtained for all subjects participating in this study. Competing interestsThe authors declare that they have no competing interests. Competing interests The authors declare that they have no competing interests."

Evidence found in paper:

"Funding Open Access funding provided by the National Institutes of Health (NIH) Research reported in this publication was performed in part as a project of the Immune Tolerance Network and supported by the National Institute of Allergy and Infectious Diseases (NIAID) of the National Institutes of Health (NIH) under Award Number UM1AI109565. This research received support from the NIH Intramural Research Programs of the National Human Genome Research Institute (NHGRI), the NIAID as well as the National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS). The Vitality trial received support from the National Health and Medical Research Council (NHMRC) of Australia (GNT1146913); Epworth Medical Foundation, The Kimberley Foundation, DHB Foundation, Rotary Club of Camberwell, The Isabel & John Gilbertson Charitable Trust and individual donors."

Protocol Registration
Open Access
Paper is freely available to read
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Assessment Info

Tool: rtransparent

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Last Updated: Aug 05, 2025