Genome mining yields putative disease-associated ROMK variants with distinct defects.

Publication Year: 2023

DOI:
10.1371/journal.pgen.1011051

PMCID:
PMC10695394

PMID:
37956218

Journal Information

Full Title: PLoS Genet

Abbreviation: PLoS Genet

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
Transparency Indicators
Click on green indicators to view evidence text
Core Indicators
Evidence found in paper:

"yours sincerely anne o'donnell-luria md phd academic editor plos genetics hua tang section editor plos genetics www plosgenetics org twitter: @plosgenetics ---------------------------------------------------- comments from the reviewers (if applicable): ---------------------------------------------------- data deposition if you have submitted a research article or front matter that has associated data that are not suitable for deposition in a subject-specific public repository (such as genbank or arrayexpress) one way to make that data available is to deposit it in the dryad digital repository .; journalid=pgenetics&manu=pgenetics-d-23-00911r1 more information about depositing data in dryad is available at http://www datadryad org/depositing . additional data are publicly available from github via the url: https://github com/mgm68/2023_romk_lof#2023_romk_lof .; additional data are publicly available from github via the url: https://github com/mgm68/2023_romk_lof#2023_romk_lof . xlsx) click here for additional data file s5"

Evidence found in paper:

"additional data are publicly available from github via the url: https://github com/mgm68/2023_romk_lof#2023_romk_lof .; additional data are publicly available from github via the url: https://github com/mgm68/2023_romk_lof#2023_romk_lof .; a comprehensive list of all scores computed by rhapsody for romk was deposited at https://github com/mgm68/2023_romk_lof/tree/main under the file name "rhapsody_all_predictions_romk"."

Evidence found in paper:

"I have read the journal’s policy and the authors of this manuscript have the following competing interests: S. Sarangi is an employee of Paradigm4, and Z.W.P. is a former employee of Paradigm4."

Evidence found in paper:

"This work was supported by grant GM131732 from the National Institutes of Health (NIH) to JLB, by grant DK079307 and DK137329 (Pittsburgh Center for Kidney Research) from the NIH to TRK, by grant DK129285 from the NIH to TRK and S. Sheng, and by award ID 826608 from the American Heart Association to NHN. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

Protocol Registration
Open Access
Paper is freely available to read
Additional Indicators
Replication
Novelty Statement
Assessment Info

Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025