Dengue and Zika RNA-RNA interactomes reveal pro- and anti-viral RNA in human cells.

Authors:
Liao KC; Xie X; Sundstrom AKB; Lim XN; Tan KK and 13 more

Journal:
Genome Biol

Publication Year: 2023

DOI:
10.1186/s13059-023-03110-9

PMCID:
PMC10696742

PMID:
38053173

Journal Information

Full Title: Genome Biol

Abbreviation: Genome Biol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
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Core Indicators
Evidence found in paper:

"availability of data and materials raw and processed data presented in this manuscript is available at geo repository (gse106483) [ 28 ]. the code is available at github ( https://github com/rghuber/zika_splash/tree/zika_analysis_pub ) [ 29 ] and zenodo (10 5281/zenodo 10113321) [ 30 ]. availability of data and materials raw and processed data presented in this manuscript is available at geo repository (gse106483"

Evidence found in paper:

"the code is available at github ( https://github com/rghuber/zika_splash/tree/zika_analysis_pub ) [ 29 ] and zenodo (10 5281/zenodo 10113321) [ 30 ]."

Evidence found in paper:

"Declarations Ethics approval and consent to participateEthical approval is not applicable for this manuscript. Competing interestsThe authors declare that they have no competing interests. Competing interests The authors declare that they have no competing interests."

Evidence found in paper:

"We thank members of the Wan lab, Shi lab, and Ooi lab for helpful discussions. YW is supported by funding from A*STAR, National Research Foundation Singapore, EMBO Young Investigatorship, and CIFAR global scholarship. RGH is supported by funding from A*STAR. The computational work for this article was partially performed on resources of the National Supercomputing Centre, Singapore (https://www.nscc.sg)."

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Open Access
Paper is freely available to read
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Last Updated: Aug 05, 2025