Quantifying the role of genome size and repeat content in adaptive variation and the architecture of flowering time in Amaranthus tuberculatus.

Journal Information

Full Title: PLoS Genet

Abbreviation: PLoS Genet

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
Transparency Indicators
Click on green indicators to view evidence text
Core Indicators
Evidence found in paper:

"plos publication stage vor-update-to-uncorrected-proof publication update 2024-01-09 data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655.; data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655. plos publication stage vor-update-to-uncorrected-proof publication update 2024-01-09 data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655.; data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655. plos publication stage vor-update-to-uncorrected-proof publication update 2024-01-09 data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655.; data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655. file s1 table (xlsx data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo"

Evidence found in paper:

"plos publication stage vor-update-to-uncorrected-proof publication update 2024-01-09 data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655.; data availability the code and metadata in our paper has been archived online at github ( https://github com/jkreinz/genomesizeevo_plosgen ) and zenodo ( 10 5281/zenodo 10366486 ) while sequence data are available for download at sra under the bioproject accession number prjna770655."

Evidence found in paper:

"The authors have declared that no competing interests exist."

Evidence found in paper:

"J.M.K. was funded by a Killam Postdoctoral Fellowship from the Killam Trusts and a Biodiversity Research Centre Bioinformatics Postdoctoral Fellowship from the University of British Columbia. S.I.W. was supported by the NSERC RGPIN-2020-05850 and a Canada research chair. J.R.S. was supported by the NSERC RGPIN-2022-04366 and the Swedish Collegium for Advanced Study. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."

Protocol Registration
Open Access
Paper is freely available to read
Additional Indicators
Replication
Novelty Statement
Assessment Info

Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025