An overlooked phenomenon: complex interactions of potential error sources on the quality of bacterial de novo genome assemblies.

"availability of data and materials codes used for the read simulations assemblies and quality metric estimations are accessible at the repository of ll ( https://github com/laczkol/readsimulation )."

"both the static and the interactive supplementary material are available at https://github com/dept-metagenom/genome-error-simulations-supplementary .; availability of data and materials codes used for the read simulations assemblies and quality metric estimations are accessible at the repository of ll ( https://github com/laczkol/readsimulation ). both the static and the interactive supplementary material are available at https://github com/dept-metagenom/genome-error-simulations-supplementary ."

"Declarations Ethics approval and consent to participateNot applicable. Consent for publicationNot applicable. Competing interestsThe authors declare no competing interests. Competing interests The authors declare no competing interests."

"Funding Open access funding provided by University of Debrecen. This research was funded by the Complex multidisciplinary health industry competence center fund for the establishment of complex multidisciplinary health industry competence center at the University of Debrecen for the development of new, innovative products and technologies (GINOP-2.3.4–15-2020–00008)."