Structural variation and DNA methylation shape the centromere-proximal meiotic crossover landscape in Arabidopsis.

Authors:
Fernandes JB; Naish M; Lian Q; Burns R; Tock AJ and 7 more

Journal:
Genome Biol

Publication Year: 2024

DOI:
10.1186/s13059-024-03163-4

PMCID:
PMC10804481

PMID:
38254210

Journal Information

Full Title: Genome Biol

Abbreviation: Genome Biol

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
5/6
83.3% Transparent
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Evidence found in paper:

"computer r code used for data analysis is available from a github page under the creative commons cc0-1 0 universal licence ( https://github com/hendersi/fernandes_et_al_scripts-data ) [ 93 ] and at zenodo: https://zenodo org/doi/10 5281/zenodo 10429614 [ 94 ]. computer r code used for data analysis is available from a github page under the creative commons cc0-1 0 universal licence ( https://github com/hendersi/fernandes_et_al_scripts-data ) [ 93 ] and at zenodo: https://zenodo org/doi/10 5281/zenodo 10429614 [ 94 ]."

Evidence found in paper:

"computer r code used for data analysis is available from a github page under the creative commons cc0-1 0 universal licence ( https://github com/hendersi/fernandes_et_al_scripts-data ) [ 93 ] and at zenodo: https://zenodo org/doi/10 5281/zenodo 10429614 [ 94 ]."

Evidence found in paper:

"Declarations Ethics approval and consent to participateNot applicable. Consent for publicationNot applicable. Competing interestsD.W. holds equity in Computomics, which advises plant breeders. D.W. also consults for KWS SE, a plant breeder and seed producer with activities throughout the world. All other authors declare that they have no competing interests. Competing interests D.W. holds equity in Computomics, which advises plant breeders. D.W. also consults for KWS SE, a plant breeder and seed producer with activities throughout the world. All other authors declare that they have no competing interests."

Evidence found in paper:

"Funding This work was supported by BBSRC grants BB/S006842/1, BB/S020012/1 and BB/V003984/1, European Research Council Consolidator Award ERC-2015-CoG-681987, Marie Curie International Training Network “MEICOM” and Human Frontier Science Program award RGP0025/2021 to IRH, by core funding from the Max Planck Society to RM and DW, Alexander von Humboldt Foundation Fellowships to QL and JBF, EMBO Long-Term postdoctoral fellowships to JBF (ALTF 329-2018) and RB (ALTF 224-2022), a Human Frontiers Science Program (HFSP) Long-Term Fellowship (LT000819/2018-L) to FAR, ERA-CAPS 1001G+ grant to DW, and a Broodbank Fellowship to MN."

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Open Access
Paper is freely available to read
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Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025