Multi-tissue metabolic and transcriptomic responses to a short-term heat stress in swine.

Journal Information

Full Title: BMC Genomics

Abbreviation: BMC Genomics

Country: Unknown

Publisher: Unknown

Language: N/A

Publication Details

Subject Category: Genetics

Available in Europe PMC: Yes

Available in PMC: Yes

PDF Available: No

Transparency Score
4/6
66.7% Transparent
Transparency Indicators
Click on green indicators to view evidence text
Core Indicators
Evidence found in paper:

"normalized expression data (log2 transformed) raw data and sample information are available under ncbi geo accession number gse240257 as superseries record including gse240251 for total blood gse240253 for adrenal gse240254 for thyroid gse240255 for scat gse240345 for liver gse240347 for muscle and gse240433 for pituitary.; the transcriptome datasets analysed during the current study are available in the ncbi geo repository with the accession number gse240257. raw data normalized data and metadata are available under https://entrepot recherche data gouv fr/dataverse/omics with the doi accession 10 57745/hcfxby.; availability of data and materials the metabolome datasets analysed during the current study are available in the omics dataverse repository from recherche data gouv with the doi accession 10 57745/hcfxby. availability of data and materials the metabolome datasets analysed during the current study are available in the omics dataverse"

Code Sharing
Evidence found in paper:

"Declarations Ethics approval and consent to participateThis study was carried out in compliance with the ARRIVE guidelines [81]. All measurements and observations on animals were performed in accordance with relevant guidelines and regulations on animal experimentation and ethics. All experimental protocols were approved by the Animal Care and Use Committee of French West Indies and Guyana (#69–2012-2). Consent for publicationNot applicable. Competing interestsThe authors declare no competing interests. Competing interests The authors declare no competing interests."

Evidence found in paper:

"Funding This study was financed by INRAE by the Adapting Agriculture and Forestry to Climate Change Meta-Program (ACCAF) as part of the PigChange project."

Protocol Registration
Open Access
Paper is freely available to read
Additional Indicators
Replication
Novelty Statement
Assessment Info

Tool: rtransparent

OST Version: N/A

Last Updated: Aug 05, 2025