Tissue-specific and cis-regulatory changes underlie parallel, adaptive gene expression evolution in house mice.

"plos publication stage vor-update-to-uncorrected-proof publication update 2024-02-14 data availability all sequencing reads generated in this study are available on the ncbi sequence read archive under accession bioproject id prjna1009445.; data availability all sequencing reads generated in this study are available on the ncbi sequence read archive under accession bioproject id prjna1009445. reviewer #2: no ---------------------------------------------------- data deposition if you have submitted a research article or front matter that has associated data that are not suitable for deposition in a subject-specific public repository (such as genbank or arrayexpress) one way to make that data available is to deposit it in the dryad digital repository .; journalid=pgenetics&manu=pgenetics-d-23-00864r1 more information about depositing data in dryad is available at http://www datadryad org/depositing . xlsx) s2 file data availability all sequencing reads generated in this study are available on the ncbi sequence read archive under accession bioproject id prjna1009445"

"The authors have declared that no competing interests exist."

"Funding and support for this work was provided by the National Institutes of Health (R01 GM074245, R01 GM127468, and R35 GM149304 to M.W.N.). This work used the Extreme Science and Engineering Discovery Environment (XSEDE), which is supported by National Science Foundation grant number ACI-1548562 to M.W.N.. S.M.D. was supported by, and received salary from, a NIH NRSA T-32 training grant GM132022. M.A.B. was supported by, and received salary from, a National Science Foundation Graduate Research Fellowship (DGE-1106400), a Junea W. Kelly Museum of Vertebrate Zoology Graduate Fellowship, and a Philomathia Foundation Graduate Fellowship. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript."